Source code for gemseo.uncertainty.distributions.scipy.composed

# Copyright 2021 IRT Saint Exupéry, https://www.irt-saintexupery.com
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU Lesser General Public
# License version 3 as published by the Free Software Foundation.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
# Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
# Contributors:
#    INITIAL AUTHORS - initial API and implementation and/or initial
#                           documentation
#        :author: Matthias De Lozzo
#    OTHER AUTHORS   - MACROSCOPIC CHANGES
"""The SciPy-based joint probability distribution.

:class:`.SPComposedDistribution` is a :class:`.ComposedDistribution`
based on the `SciPy <https://docs.scipy.org/doc/scipy/tutorial/stats.html>`_ library.

.. warning::

   For the moment,
   there is no copula that can be used with :class:`.SPComposedDistribution`;
   if you want to introduce dependency between random variables,
   please consider :class:`.OTComposedDistribution`.
"""

from __future__ import annotations

from typing import TYPE_CHECKING
from typing import Callable

if TYPE_CHECKING:
    from collections.abc import Iterable
    from collections.abc import Sequence

    from gemseo.uncertainty.distributions.scipy.distribution import SPDistribution

from numpy import array
from numpy import ndarray

from gemseo.uncertainty.distributions.composed import ComposedDistribution


[docs] class SPComposedDistribution(ComposedDistribution): """The SciPy-based joint probability distribution.""" def __init__( # noqa: D107 self, distributions: Sequence[SPDistribution], copula: None = None, variable: str = "", ) -> None: """ Raises: NotImplementedError: When the copula is not ``None``. """ # noqa: D205 D212 D415 if copula is not None: msg = "There is not copula distribution yet for SciPy-based distributions." raise NotImplementedError(msg) super().__init__(distributions, copula=copula, variable=variable) self.distribution = distributions self._mapping = {} index = 0 for marginal_index, marginal in enumerate(self.distribution): for submarginal_index in range(marginal.dimension): self._mapping[index] = (marginal_index, submarginal_index) index += 1 self._set_bounds(distributions)
[docs] def compute_cdf( # noqa: D102 self, vector: Iterable[float], ) -> ndarray: tmp = [] for index, value in enumerate(vector): id1 = self._mapping[index][0] id2 = self._mapping[index][1] tmp.append(self.distribution[id1].marginals[id2].cdf(value)) return array(tmp)
[docs] def compute_inverse_cdf( # noqa: D102 self, vector: Iterable[float], ) -> ndarray: tmp = [] for index, value in enumerate(vector): id1 = self._mapping[index][0] id2 = self._mapping[index][1] tmp.append(self.distribution[id1].marginals[id2].ppf(value)) return array(tmp)
def _pdf( # noqa: D102 self, index: int, ) -> Callable: id1 = self._mapping[index][0] id2 = self._mapping[index][1] def pdf( point: float, ) -> float: """Probability Density Function (PDF). Args: point: An evaluation point. Returns: The PDF value at the evaluation point. """ return self.distribution[id1].marginals[id2].pdf(point) return pdf def _cdf( # noqa: D102 self, index: int, ) -> Callable: id1 = self._mapping[index][0] id2 = self._mapping[index][1] def cdf( level: float, ) -> float: """Cumulative Density Function (CDF). Args: level: A probability level. Returns: The CDF value for the probability level. """ return self.distribution[id1].marginals[id2].cdf(level) return cdf